Comparative genotyping ofStreptococcus mutansby repetitive extragenic palindromic polymerase chain reaction and multilocus sequence typing
نویسندگان
چکیده
منابع مشابه
Molecular Analysis of Shigella sonnei Strains Isolated from Hospitals of Tehran and Ilam Cities Using Repetitive Extragenic Palindromic Polymerase Chain Reaction (REP-PCR)
Background and Objective: Shigella species belong to the family Enterobacteriaceae, which cause dysentery with abdominal pain and tenesmus in human. Our country is one of the endemic and occasional epidemic areas of the disease. In the present study, Repetitive Extragenic Palindromic Polymerase Chain Reaction (REP-PCR) technique that has high differentiation and specificity power compared to ph...
متن کاملMolecular typing of avian Escherichia coli isolates by enterobacterial repetitive intergenic consensus sequences-polymerase chain reaction (ERIC-PCR)
BACKGROUND: Colibacillosis is one of the most economically important diseases of poultry worldwide. OBJECTIVES: This study was conducted to examine the clonal relatedness and typing of 95 avian Escherichia coli isolates by ERIC-PCR. METHODS: Sixty-three E. coli isolates from two common manifestations of colibacillosis (yolk sac infection and colisepticemia) and 32 isolates from feces of apparen...
متن کاملComparative Genotyping of Campylobacter Coli Using Multilocus Sequence Typing and Pulsed Field Gel Electrophoresis
A total of 100 Campylobacter coli isolates from swine reared in conventional and antimicrobial free (ABF) farms were genotyped using multilocus sequence typing (MLST) and pulsed field gel electrophoresis (PFGE) to evaluate their discriminatory power, throughput and index of association to determine the genotypic similarity and clonal structure of the isolates. MLST had a higher discriminatory p...
متن کاملEnterobacterial Repetitive Intergenic Consensus Polymerase Chain Reaction (ERIC-PCR) Genotyping of Escherichia coli Strains Isolated from Different Animal Stool Specimens
Background: Escherichia coli is a commensal-pathogenic organism, which includes a wide range of strains. Despite several advanced molecular-genomic technologies for detecting and identifying different strains of E. coli, Enterobacterial Repetitive Intergenic Consensus Polymerase Chain Reaction (ERIC-PCR) technique is ...
متن کاملSpecies-specific repetitive extragenic palindromic (REP) sequences in Pseudomonas putida.
Pseudomonas putida KT2440 is a soil bacterium that effectively colonises the roots of many plants and degrades a variety of toxic aromatic compounds. Its genome has recently been sequenced. We describe that a 35 bp sequence with the structure of an imperfect palindrome, originally found repeated three times downstream of the rpoH gene terminator, is detected more than 800 times in the chromosom...
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ژورنال
عنوان ژورنال: Molecular Oral Microbiology
سال: 2012
ISSN: 2041-1006
DOI: 10.1111/omi.12002